Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Gm25990-201ENSMUST00000102440 86 ntBASIC17.56■□□□□ 0.4
Ush1gQ80T11 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Psmb5-202ENSMUST00000227257 622 ntBASIC17.56■□□□□ 0.4
Ush1gQ80T11 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ush1gQ80T11 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.56■□□□□ 0.4
Ush1gQ80T11 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ush1gQ80T11 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Gm11779-201ENSMUST00000118541 368 ntBASIC17.55■□□□□ 0.4
Ush1gQ80T11 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.55■□□□□ 0.4
Ush1gQ80T11 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.55■□□□□ 0.4
Ush1gQ80T11 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ush1gQ80T11 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ush1gQ80T11 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ush1gQ80T11 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ush1gQ80T11 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ush1gQ80T11 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ush1gQ80T11 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ush1gQ80T11 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.54■□□□□ 0.4
Ush1gQ80T11 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.54■□□□□ 0.4
Ush1gQ80T11 Gm36967-201ENSMUST00000193814 266 ntBASIC17.54■□□□□ 0.4
Ush1gQ80T11 Gm2756-201ENSMUST00000195851 400 ntBASIC17.54■□□□□ 0.4
Ush1gQ80T11 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ush1gQ80T11 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ush1gQ80T11 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.54■□□□□ 0.4
Ush1gQ80T11 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ush1gQ80T11 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ush1gQ80T11 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.54■□□□□ 0.4
Ush1gQ80T11 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ush1gQ80T11 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ush1gQ80T11 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ush1gQ80T11 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ush1gQ80T11 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ush1gQ80T11 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ush1gQ80T11 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ush1gQ80T11 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ush1gQ80T11 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Ush1gQ80T11 Gm27702-201ENSMUST00000184512 56 ntBASIC17.53■□□□□ 0.4
Ush1gQ80T11 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ush1gQ80T11 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ush1gQ80T11 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ush1gQ80T11 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ush1gQ80T11 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.53■□□□□ 0.4
Ush1gQ80T11 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ush1gQ80T11 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ush1gQ80T11 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ush1gQ80T11 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ush1gQ80T11 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ush1gQ80T11 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ush1gQ80T11 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ush1gQ80T11 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ush1gQ80T11 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ush1gQ80T11 Gm13418-201ENSMUST00000119097 944 ntBASIC17.52■□□□□ 0.4
Ush1gQ80T11 Gm15173-201ENSMUST00000122049 433 ntBASIC17.52■□□□□ 0.4
Ush1gQ80T11 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ush1gQ80T11 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.52■□□□□ 0.4
Ush1gQ80T11 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.52■□□□□ 0.4
Ush1gQ80T11 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms