Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sned1Q70E20 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sned1Q70E20 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sned1Q70E20 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.34■□□□□ 0.69
Sned1Q70E20 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sned1Q70E20 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sned1Q70E20 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sned1Q70E20 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.34■□□□□ 0.69
Sned1Q70E20 Gm13823-201ENSMUST00000119930 345 ntBASIC19.34■□□□□ 0.69
Sned1Q70E20 Gm6257-201ENSMUST00000163864 910 ntBASIC19.34■□□□□ 0.69
Sned1Q70E20 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Sned1Q70E20 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Sned1Q70E20 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.34■□□□□ 0.69
Sned1Q70E20 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sned1Q70E20 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.34■□□□□ 0.69
Sned1Q70E20 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sned1Q70E20 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sned1Q70E20 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sned1Q70E20 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sned1Q70E20 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sned1Q70E20 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sned1Q70E20 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sned1Q70E20 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sned1Q70E20 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sned1Q70E20 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sned1Q70E20 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Sned1Q70E20 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sned1Q70E20 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Sned1Q70E20 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sned1Q70E20 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.33■□□□□ 0.69
Sned1Q70E20 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sned1Q70E20 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sned1Q70E20 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.33■□□□□ 0.68
Sned1Q70E20 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.33■□□□□ 0.68
Sned1Q70E20 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sned1Q70E20 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC19.33■□□□□ 0.68
Sned1Q70E20 Gm27306-201ENSMUST00000183970 107 ntBASIC19.33■□□□□ 0.68
Sned1Q70E20 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.33■□□□□ 0.68
Sned1Q70E20 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sned1Q70E20 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sned1Q70E20 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sned1Q70E20 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC19.33■□□□□ 0.68
Sned1Q70E20 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.33■□□□□ 0.68
Sned1Q70E20 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.33■□□□□ 0.68
Sned1Q70E20 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sned1Q70E20 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sned1Q70E20 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sned1Q70E20 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sned1Q70E20 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sned1Q70E20 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sned1Q70E20 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sned1Q70E20 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sned1Q70E20 Gm27618-201ENSMUST00000183671 60 ntBASIC19.32■□□□□ 0.68
Sned1Q70E20 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sned1Q70E20 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sned1Q70E20 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sned1Q70E20 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sned1Q70E20 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sned1Q70E20 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sned1Q70E20 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sned1Q70E20 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sned1Q70E20 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sned1Q70E20 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sned1Q70E20 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.31■□□□□ 0.68
Sned1Q70E20 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sned1Q70E20 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC19.31■□□□□ 0.68
Sned1Q70E20 Gm38294-201ENSMUST00000192831 381 ntBASIC19.31■□□□□ 0.68
Sned1Q70E20 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.31■□□□□ 0.68
Sned1Q70E20 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sned1Q70E20 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sned1Q70E20 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.31■□□□□ 0.68
Sned1Q70E20 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.31■□□□□ 0.68
Sned1Q70E20 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sned1Q70E20 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sned1Q70E20 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sned1Q70E20 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sned1Q70E20 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sned1Q70E20 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Sned1Q70E20 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sned1Q70E20 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sned1Q70E20 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sned1Q70E20 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sned1Q70E20 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sned1Q70E20 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sned1Q70E20 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sned1Q70E20 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sned1Q70E20 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.29■□□□□ 0.68
Sned1Q70E20 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Sned1Q70E20 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC19.29■□□□□ 0.68
Sned1Q70E20 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sned1Q70E20 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sned1Q70E20 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sned1Q70E20 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sned1Q70E20 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.29■□□□□ 0.68
Sned1Q70E20 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.29■□□□□ 0.68
Sned1Q70E20 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sned1Q70E20 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sned1Q70E20 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sned1Q70E20 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC19.28■□□□□ 0.68
Sned1Q70E20 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms