Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npc1l1Q6T3U4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 Gm7506-201ENSMUST00000207758 815 ntBASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npc1l1Q6T3U4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Npc1l1Q6T3U4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 Gm4535-201ENSMUST00000182274 558 ntBASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 Gm10355-201ENSMUST00000097146 517 ntBASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npc1l1Q6T3U4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Gm13418-201ENSMUST00000119097 944 ntBASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.2■□□□□ 0.66
Npc1l1Q6T3U4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Npc1l1Q6T3U4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms