Protein–RNA interactions for Protein: Q6Q473

Clca4a, Calcium-activated chloride channel regulator 4A, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca4aQ6Q473 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clca4aQ6Q473 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.21■□□□□ 0.51
Clca4aQ6Q473 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clca4aQ6Q473 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clca4aQ6Q473 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.21■□□□□ 0.51
Clca4aQ6Q473 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
Clca4aQ6Q473 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clca4aQ6Q473 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clca4aQ6Q473 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Clca4aQ6Q473 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clca4aQ6Q473 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clca4aQ6Q473 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clca4aQ6Q473 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clca4aQ6Q473 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clca4aQ6Q473 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.2■□□□□ 0.5
Clca4aQ6Q473 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clca4aQ6Q473 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clca4aQ6Q473 Gm10060-201ENSMUST00000212002 111 ntBASIC18.2■□□□□ 0.5
Clca4aQ6Q473 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clca4aQ6Q473 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clca4aQ6Q473 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clca4aQ6Q473 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.19■□□□□ 0.5
Clca4aQ6Q473 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.19■□□□□ 0.5
Clca4aQ6Q473 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Mir5131-201ENSMUST00000175426 93 ntBASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clca4aQ6Q473 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Gm18733-201ENSMUST00000173950 856 ntBASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Gm6089-201ENSMUST00000197666 938 ntBASIC18.17■□□□□ 0.5
Clca4aQ6Q473 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Gm2651-201ENSMUST00000203560 838 ntBASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clca4aQ6Q473 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.16■□□□□ 0.5
Clca4aQ6Q473 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clca4aQ6Q473 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Clca4aQ6Q473 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Clca4aQ6Q473 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clca4aQ6Q473 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clca4aQ6Q473 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clca4aQ6Q473 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.16■□□□□ 0.5
Clca4aQ6Q473 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clca4aQ6Q473 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.16■□□□□ 0.5
Clca4aQ6Q473 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.16■□□□□ 0.5
Clca4aQ6Q473 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.16■□□□□ 0.5
Clca4aQ6Q473 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms