Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Gm11594-201ENSMUST00000122313 162 ntBASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NfrkbQ6PIJ4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Gm15173-201ENSMUST00000122049 433 ntBASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Gm5264-201ENSMUST00000190584 848 ntBASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Gm2213-201ENSMUST00000197485 688 ntBASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfrkbQ6PIJ4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfrkbQ6PIJ4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NfrkbQ6PIJ4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NfrkbQ6PIJ4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NfrkbQ6PIJ4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
NfrkbQ6PIJ4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NfrkbQ6PIJ4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NfrkbQ6PIJ4 Gm4459-201ENSMUST00000118750 468 ntBASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 Gm15467-201ENSMUST00000120582 445 ntBASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 Gm6089-201ENSMUST00000197666 938 ntBASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 AV026068-213ENSMUST00000223675 1171 ntBASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms