Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim37Q6PCX9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trim37Q6PCX9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim37Q6PCX9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Trim37Q6PCX9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim37Q6PCX9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim37Q6PCX9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim37Q6PCX9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim37Q6PCX9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim37Q6PCX9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim37Q6PCX9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim37Q6PCX9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim37Q6PCX9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim37Q6PCX9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim37Q6PCX9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.79■□□□□ 0.44
Trim37Q6PCX9 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.79■□□□□ 0.44
Trim37Q6PCX9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trim37Q6PCX9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim37Q6PCX9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim37Q6PCX9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim37Q6PCX9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim37Q6PCX9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim37Q6PCX9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim37Q6PCX9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim37Q6PCX9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim37Q6PCX9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Trim37Q6PCX9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim37Q6PCX9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim37Q6PCX9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim37Q6PCX9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trim37Q6PCX9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim37Q6PCX9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms