Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.6■□□□□ 0.41
Smchd1Q6P5D8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smchd1Q6P5D8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.58■□□□□ 0.41
Smchd1Q6P5D8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smchd1Q6P5D8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smchd1Q6P5D8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Smchd1Q6P5D8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Smchd1Q6P5D8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smchd1Q6P5D8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smchd1Q6P5D8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.58■□□□□ 0.4
Smchd1Q6P5D8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smchd1Q6P5D8 Gm5264-201ENSMUST00000190584 848 ntBASIC17.58■□□□□ 0.4
Smchd1Q6P5D8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smchd1Q6P5D8 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.58■□□□□ 0.4
Smchd1Q6P5D8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smchd1Q6P5D8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Smchd1Q6P5D8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 AV026068-213ENSMUST00000223675 1171 ntBASIC17.57■□□□□ 0.4
Smchd1Q6P5D8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms