Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sp140Q6NSQ5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sp140Q6NSQ5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sp140Q6NSQ5 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Sp140Q6NSQ5 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sp140Q6NSQ5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sp140Q6NSQ5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Prob1-201ENSMUST00000097619 3021 ntBASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sp140Q6NSQ5 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sp140Q6NSQ5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sp140Q6NSQ5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sp140Q6NSQ5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Sp140Q6NSQ5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sp140Q6NSQ5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sp140Q6NSQ5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Sp140Q6NSQ5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sp140Q6NSQ5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.33■□□□□ 0.2
Sp140Q6NSQ5 Gm6345-202ENSMUST00000180900 204 ntBASIC16.33■□□□□ 0.2
Sp140Q6NSQ5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.33■□□□□ 0.2
Sp140Q6NSQ5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Sp140Q6NSQ5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sp140Q6NSQ5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sp140Q6NSQ5 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sp140Q6NSQ5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sp140Q6NSQ5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sp140Q6NSQ5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sp140Q6NSQ5 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sp140Q6NSQ5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sp140Q6NSQ5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Sp140Q6NSQ5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sp140Q6NSQ5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Gm10052-201ENSMUST00000168019 960 ntBASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Gm6623-201ENSMUST00000173570 544 ntBASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 Gm44430-201ENSMUST00000203376 995 ntBASIC16.31■□□□□ 0.2
Sp140Q6NSQ5 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms