Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SpenQ62504 Gm11745-201ENSMUST00000121669 448 ntBASIC14.2□□□□□ -0.14
SpenQ62504 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SpenQ62504 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SpenQ62504 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SpenQ62504 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.2□□□□□ -0.14
SpenQ62504 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SpenQ62504 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
SpenQ62504 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.2□□□□□ -0.14
SpenQ62504 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SpenQ62504 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SpenQ62504 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SpenQ62504 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.2□□□□□ -0.14
SpenQ62504 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.2□□□□□ -0.14
SpenQ62504 Mir449b-201ENSMUST00000104833 80 ntBASIC14.2□□□□□ -0.14
SpenQ62504 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SpenQ62504 Gm27437-201ENSMUST00000183429 107 ntBASIC14.2□□□□□ -0.14
SpenQ62504 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.2□□□□□ -0.14
SpenQ62504 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SpenQ62504 Gm45167-201ENSMUST00000208007 322 ntBASIC14.2□□□□□ -0.14
SpenQ62504 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SpenQ62504 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SpenQ62504 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SpenQ62504 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SpenQ62504 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SpenQ62504 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.19□□□□□ -0.14
SpenQ62504 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SpenQ62504 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SpenQ62504 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.19□□□□□ -0.14
SpenQ62504 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SpenQ62504 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SpenQ62504 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SpenQ62504 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SpenQ62504 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SpenQ62504 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SpenQ62504 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SpenQ62504 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SpenQ62504 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SpenQ62504 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SpenQ62504 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SpenQ62504 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.19□□□□□ -0.14
SpenQ62504 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.19□□□□□ -0.14
SpenQ62504 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SpenQ62504 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SpenQ62504 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SpenQ62504 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
SpenQ62504 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SpenQ62504 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SpenQ62504 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SpenQ62504 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.18□□□□□ -0.14
SpenQ62504 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SpenQ62504 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SpenQ62504 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SpenQ62504 Gm27306-201ENSMUST00000183970 107 ntBASIC14.18□□□□□ -0.14
SpenQ62504 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.18□□□□□ -0.14
SpenQ62504 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SpenQ62504 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SpenQ62504 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SpenQ62504 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SpenQ62504 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SpenQ62504 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SpenQ62504 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SpenQ62504 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SpenQ62504 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SpenQ62504 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SpenQ62504 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SpenQ62504 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SpenQ62504 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SpenQ62504 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SpenQ62504 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.17□□□□□ -0.14
SpenQ62504 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SpenQ62504 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SpenQ62504 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.17□□□□□ -0.14
SpenQ62504 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SpenQ62504 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.17□□□□□ -0.14
SpenQ62504 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.17□□□□□ -0.14
SpenQ62504 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.17□□□□□ -0.14
SpenQ62504 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SpenQ62504 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SpenQ62504 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SpenQ62504 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.16□□□□□ -0.14
SpenQ62504 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.16□□□□□ -0.14
SpenQ62504 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
SpenQ62504 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SpenQ62504 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SpenQ62504 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SpenQ62504 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.16□□□□□ -0.14
SpenQ62504 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SpenQ62504 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SpenQ62504 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SpenQ62504 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SpenQ62504 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SpenQ62504 Gm22065-201ENSMUST00000103753 110 ntBASIC14.16□□□□□ -0.14
SpenQ62504 Gm22066-201ENSMUST00000103761 110 ntBASIC14.16□□□□□ -0.14
SpenQ62504 Gm24932-201ENSMUST00000103763 110 ntBASIC14.16□□□□□ -0.14
SpenQ62504 Gm24115-201ENSMUST00000103799 110 ntBASIC14.16□□□□□ -0.14
SpenQ62504 Gm22190-201ENSMUST00000103827 110 ntBASIC14.16□□□□□ -0.14
SpenQ62504 Gm22191-201ENSMUST00000103831 110 ntBASIC14.16□□□□□ -0.14
SpenQ62504 Gm24721-201ENSMUST00000103849 110 ntBASIC14.16□□□□□ -0.14
SpenQ62504 Gm28018-201ENSMUST00000103869 110 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms