Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AtmQ62388 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AtmQ62388 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
AtmQ62388 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AtmQ62388 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AtmQ62388 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.12■□□□□ 0.01
AtmQ62388 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AtmQ62388 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AtmQ62388 Gm45167-201ENSMUST00000208007 322 ntBASIC15.12■□□□□ 0.01
AtmQ62388 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.12■□□□□ 0.01
AtmQ62388 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
AtmQ62388 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.12■□□□□ 0.01
AtmQ62388 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AtmQ62388 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AtmQ62388 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AtmQ62388 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AtmQ62388 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.11■□□□□ 0.01
AtmQ62388 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.11■□□□□ 0.01
AtmQ62388 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AtmQ62388 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AtmQ62388 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.11■□□□□ 0.01
AtmQ62388 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.11■□□□□ 0.01
AtmQ62388 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AtmQ62388 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AtmQ62388 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AtmQ62388 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
AtmQ62388 Gm15653-201ENSMUST00000119247 907 ntBASIC15.11■□□□□ 0.01
AtmQ62388 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.11■□□□□ 0.01
AtmQ62388 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.11■□□□□ 0.01
AtmQ62388 Mir6404-201ENSMUST00000183699 94 ntBASIC15.11■□□□□ 0.01
AtmQ62388 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.11■□□□□ 0.01
AtmQ62388 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AtmQ62388 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
AtmQ62388 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AtmQ62388 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AtmQ62388 Gm11745-201ENSMUST00000121669 448 ntBASIC15.11■□□□□ 0.01
AtmQ62388 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.11■□□□□ 0.01
AtmQ62388 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
AtmQ62388 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AtmQ62388 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AtmQ62388 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
AtmQ62388 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AtmQ62388 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AtmQ62388 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AtmQ62388 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
AtmQ62388 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AtmQ62388 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AtmQ62388 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AtmQ62388 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AtmQ62388 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AtmQ62388 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AtmQ62388 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AtmQ62388 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AtmQ62388 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AtmQ62388 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AtmQ62388 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AtmQ62388 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
AtmQ62388 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AtmQ62388 Gm15427-201ENSMUST00000117288 531 ntBASIC15.1■□□□□ 0.01
AtmQ62388 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.1■□□□□ 0.01
AtmQ62388 Rprl2-201ENSMUST00000157150 290 ntBASIC15.1■□□□□ 0.01
AtmQ62388 Mir6420-201ENSMUST00000185032 102 ntBASIC15.1■□□□□ 0.01
AtmQ62388 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AtmQ62388 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
AtmQ62388 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
AtmQ62388 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
AtmQ62388 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.09■□□□□ 0.01
AtmQ62388 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
AtmQ62388 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
AtmQ62388 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
AtmQ62388 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
AtmQ62388 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
AtmQ62388 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.09■□□□□ 0.01
AtmQ62388 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.09■□□□□ 0.01
AtmQ62388 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
AtmQ62388 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.09■□□□□ 0.01
AtmQ62388 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
AtmQ62388 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AtmQ62388 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.08■□□□□ 0.01
AtmQ62388 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AtmQ62388 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AtmQ62388 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.08■□□□□ 0
AtmQ62388 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.08■□□□□ 0
AtmQ62388 Gm43433-201ENSMUST00000196573 481 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms