Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.81□□□□□ -0.2
Clns1aQ61189 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Clns1aQ61189 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Gm10849-201ENSMUST00000100397 618 ntBASIC13.81□□□□□ -0.2
Clns1aQ61189 Gm37292-201ENSMUST00000192062 758 ntBASIC13.81□□□□□ -0.2
Clns1aQ61189 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.81□□□□□ -0.2
Clns1aQ61189 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.81□□□□□ -0.2
Clns1aQ61189 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Clns1aQ61189 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Clns1aQ61189 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clns1aQ61189 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clns1aQ61189 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Gm12896-201ENSMUST00000118430 226 ntBASIC13.8□□□□□ -0.2
Clns1aQ61189 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Clns1aQ61189 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Clns1aQ61189 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Clns1aQ61189 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clns1aQ61189 App-207ENSMUST00000227737 2827 ntBASIC13.8□□□□□ -0.2
Clns1aQ61189 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clns1aQ61189 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
Clns1aQ61189 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.79□□□□□ -0.2
Clns1aQ61189 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.79□□□□□ -0.2
Clns1aQ61189 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Clns1aQ61189 Gm26571-201ENSMUST00000181399 666 ntBASIC13.79□□□□□ -0.2
Clns1aQ61189 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.79□□□□□ -0.2
Clns1aQ61189 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Clns1aQ61189 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Clns1aQ61189 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.79□□□□□ -0.2
Clns1aQ61189 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Clns1aQ61189 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clns1aQ61189 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Clns1aQ61189 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Clns1aQ61189 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Clns1aQ61189 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Clns1aQ61189 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms