Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ptch1Q61115 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ptch1Q61115 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ptch1Q61115 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ptch1Q61115 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC23.08■■□□□ 1.29
Ptch1Q61115 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ptch1Q61115 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ptch1Q61115 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ptch1Q61115 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Ptch1Q61115 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ptch1Q61115 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC23.08■■□□□ 1.28
Ptch1Q61115 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Ptch1Q61115 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Ptch1Q61115 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC23.08■■□□□ 1.28
Ptch1Q61115 Wdyhv1-203ENSMUST00000226889 394 ntBASIC23.08■■□□□ 1.28
Ptch1Q61115 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ptch1Q61115 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Ptch1Q61115 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC23.07■■□□□ 1.28
Ptch1Q61115 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptch1Q61115 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ptch1Q61115 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptch1Q61115 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptch1Q61115 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptch1Q61115 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptch1Q61115 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Ptch1Q61115 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ptch1Q61115 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptch1Q61115 Gm25287-201ENSMUST00000103846 110 ntBASIC23.07■■□□□ 1.28
Ptch1Q61115 Gm22918-201ENSMUST00000103855 110 ntBASIC23.07■■□□□ 1.28
Ptch1Q61115 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC23.07■■□□□ 1.28
Ptch1Q61115 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptch1Q61115 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptch1Q61115 Gm5779-201ENSMUST00000218467 910 ntBASIC23.07■■□□□ 1.28
Ptch1Q61115 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Ptch1Q61115 AC159621.2-201ENSMUST00000223519 1326 ntBASIC23.07■■□□□ 1.28
Ptch1Q61115 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Ptch1Q61115 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptch1Q61115 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptch1Q61115 Gm29361-201ENSMUST00000183323 2000 ntBASIC23.06■■□□□ 1.28
Ptch1Q61115 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptch1Q61115 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ptch1Q61115 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC23.06■■□□□ 1.28
Ptch1Q61115 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC23.06■■□□□ 1.28
Ptch1Q61115 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptch1Q61115 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC23.06■■□□□ 1.28
Ptch1Q61115 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptch1Q61115 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ptch1Q61115 Gm38294-201ENSMUST00000192831 381 ntBASIC23.06■■□□□ 1.28
Ptch1Q61115 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC23.06■■□□□ 1.28
Ptch1Q61115 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptch1Q61115 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptch1Q61115 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptch1Q61115 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptch1Q61115 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptch1Q61115 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptch1Q61115 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ptch1Q61115 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ptch1Q61115 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ptch1Q61115 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Ptch1Q61115 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Ptch1Q61115 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Ptch1Q61115 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ptch1Q61115 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC23.05■■□□□ 1.28
Ptch1Q61115 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Ptch1Q61115 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ptch1Q61115 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Ptch1Q61115 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC23.05■■□□□ 1.28
Ptch1Q61115 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ptch1Q61115 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Ptch1Q61115 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptch1Q61115 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptch1Q61115 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptch1Q61115 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptch1Q61115 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptch1Q61115 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC23.04■■□□□ 1.28
Ptch1Q61115 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptch1Q61115 Grk6-207ENSMUST00000225925 2769 ntBASIC23.04■■□□□ 1.28
Ptch1Q61115 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptch1Q61115 Gm5112-201ENSMUST00000204407 2368 ntBASIC23.04■■□□□ 1.28
Ptch1Q61115 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptch1Q61115 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ptch1Q61115 Gm12008-201ENSMUST00000117791 755 ntBASIC23.03■■□□□ 1.28
Ptch1Q61115 Gm24158-201ENSMUST00000175263 71 ntBASIC23.03■■□□□ 1.28
Ptch1Q61115 Gm27430-201ENSMUST00000184585 107 ntBASIC23.03■■□□□ 1.28
Ptch1Q61115 Gm44333-201ENSMUST00000197168 107 ntBASIC23.03■■□□□ 1.28
Ptch1Q61115 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ptch1Q61115 Gm18057-201ENSMUST00000208220 503 ntBASIC23.03■■□□□ 1.28
Ptch1Q61115 CT025555.1-201ENSMUST00000225901 1217 ntBASIC23.03■■□□□ 1.28
Ptch1Q61115 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ptch1Q61115 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ptch1Q61115 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ptch1Q61115 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ptch1Q61115 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ptch1Q61115 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ptch1Q61115 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Ptch1Q61115 Gm27618-201ENSMUST00000183671 60 ntBASIC23.02■■□□□ 1.28
Ptch1Q61115 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ptch1Q61115 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptch1Q61115 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptch1Q61115 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms