Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scaf1Q5U4C3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Scaf1Q5U4C3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.92■□□□□ 0.94
Scaf1Q5U4C3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Scaf1Q5U4C3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Scaf1Q5U4C3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC20.92■□□□□ 0.94
Scaf1Q5U4C3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scaf1Q5U4C3 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.92■□□□□ 0.94
Scaf1Q5U4C3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
Scaf1Q5U4C3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scaf1Q5U4C3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scaf1Q5U4C3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Scaf1Q5U4C3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scaf1Q5U4C3 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.92■□□□□ 0.94
Scaf1Q5U4C3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Scaf1Q5U4C3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scaf1Q5U4C3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scaf1Q5U4C3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scaf1Q5U4C3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.91■□□□□ 0.94
Scaf1Q5U4C3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Scaf1Q5U4C3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC20.91■□□□□ 0.94
Scaf1Q5U4C3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Scaf1Q5U4C3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Scaf1Q5U4C3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scaf1Q5U4C3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scaf1Q5U4C3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Scaf1Q5U4C3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Scaf1Q5U4C3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scaf1Q5U4C3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Scaf1Q5U4C3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Scaf1Q5U4C3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Scaf1Q5U4C3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scaf1Q5U4C3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scaf1Q5U4C3 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.89■□□□□ 0.93
Scaf1Q5U4C3 Gm14722-201ENSMUST00000118943 689 ntBASIC20.89■□□□□ 0.93
Scaf1Q5U4C3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Scaf1Q5U4C3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scaf1Q5U4C3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scaf1Q5U4C3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scaf1Q5U4C3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scaf1Q5U4C3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Scaf1Q5U4C3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Scaf1Q5U4C3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scaf1Q5U4C3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scaf1Q5U4C3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scaf1Q5U4C3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scaf1Q5U4C3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scaf1Q5U4C3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scaf1Q5U4C3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scaf1Q5U4C3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scaf1Q5U4C3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scaf1Q5U4C3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms