Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shroom1Q5SX79 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shroom1Q5SX79 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shroom1Q5SX79 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shroom1Q5SX79 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shroom1Q5SX79 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shroom1Q5SX79 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.08■□□□□ 0.33
Shroom1Q5SX79 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Shroom1Q5SX79 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Dancr-204ENSMUST00000132389 2347 ntBASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom1Q5SX79 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Gm10060-201ENSMUST00000212002 111 ntBASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom1Q5SX79 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Gm25745-201ENSMUST00000174945 133 ntBASIC17.06■□□□□ 0.32
Shroom1Q5SX79 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Gm18206-201ENSMUST00000207027 926 ntBASIC17.06■□□□□ 0.32
Shroom1Q5SX79 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Shroom1Q5SX79 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom1Q5SX79 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms