Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm27275-201ENSMUST00000184318 272 ntBASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15-1-dv6-1Q5R1D2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms