Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col27a1Q5QNQ9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.44■□□□□ 0.06
Col27a1Q5QNQ9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col27a1Q5QNQ9 Gm12490-201ENSMUST00000120255 560 ntBASIC15.44■□□□□ 0.06
Col27a1Q5QNQ9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col27a1Q5QNQ9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.44■□□□□ 0.06
Col27a1Q5QNQ9 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.44■□□□□ 0.06
Col27a1Q5QNQ9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col27a1Q5QNQ9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col27a1Q5QNQ9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Col27a1Q5QNQ9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col27a1Q5QNQ9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col27a1Q5QNQ9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Col27a1Q5QNQ9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Col27a1Q5QNQ9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Col27a1Q5QNQ9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col27a1Q5QNQ9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Gm7488-201ENSMUST00000117148 684 ntBASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Gm18057-201ENSMUST00000208220 503 ntBASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Gm27306-201ENSMUST00000183970 107 ntBASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Gm10154-201ENSMUST00000084445 354 ntBASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col27a1Q5QNQ9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col27a1Q5QNQ9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col27a1Q5QNQ9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
Col27a1Q5QNQ9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col27a1Q5QNQ9 Mir8102-201ENSMUST00000184148 139 ntBASIC15.42■□□□□ 0.06
Col27a1Q5QNQ9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.42■□□□□ 0.06
Col27a1Q5QNQ9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Col27a1Q5QNQ9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.42■□□□□ 0.06
Col27a1Q5QNQ9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col27a1Q5QNQ9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col27a1Q5QNQ9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col27a1Q5QNQ9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col27a1Q5QNQ9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Col27a1Q5QNQ9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Col27a1Q5QNQ9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col27a1Q5QNQ9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.42■□□□□ 0.06
Col27a1Q5QNQ9 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.41■□□□□ 0.06
Col27a1Q5QNQ9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col27a1Q5QNQ9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col27a1Q5QNQ9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.41■□□□□ 0.06
Col27a1Q5QNQ9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col27a1Q5QNQ9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.41■□□□□ 0.06
Col27a1Q5QNQ9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.41■□□□□ 0.06
Col27a1Q5QNQ9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col27a1Q5QNQ9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col27a1Q5QNQ9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col27a1Q5QNQ9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col27a1Q5QNQ9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Col27a1Q5QNQ9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col27a1Q5QNQ9 Gm6415-201ENSMUST00000118488 348 ntBASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Gm14719-201ENSMUST00000121891 340 ntBASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Gm29541-201ENSMUST00000191351 678 ntBASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col27a1Q5QNQ9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms