Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3hdm4Q4VBF2 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.34■□□□□ 0.37
R3hdm4Q4VBF2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
R3hdm4Q4VBF2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.34■□□□□ 0.37
R3hdm4Q4VBF2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3hdm4Q4VBF2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3hdm4Q4VBF2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3hdm4Q4VBF2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3hdm4Q4VBF2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
R3hdm4Q4VBF2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
R3hdm4Q4VBF2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
R3hdm4Q4VBF2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
R3hdm4Q4VBF2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
R3hdm4Q4VBF2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
R3hdm4Q4VBF2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.33■□□□□ 0.36
R3hdm4Q4VBF2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.33■□□□□ 0.36
R3hdm4Q4VBF2 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.33■□□□□ 0.36
R3hdm4Q4VBF2 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.33■□□□□ 0.36
R3hdm4Q4VBF2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3hdm4Q4VBF2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3hdm4Q4VBF2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
R3hdm4Q4VBF2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3hdm4Q4VBF2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3hdm4Q4VBF2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
R3hdm4Q4VBF2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3hdm4Q4VBF2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3hdm4Q4VBF2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
R3hdm4Q4VBF2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
R3hdm4Q4VBF2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Gm34391-201ENSMUST00000203706 907 ntBASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
R3hdm4Q4VBF2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Gm25745-201ENSMUST00000174945 133 ntBASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
R3hdm4Q4VBF2 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms