Protein–RNA interactions for Protein: Q3UJV1

Ccdc61, Coiled-coil domain-containing protein 61, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc61Q3UJV1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ccdc61Q3UJV1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc61Q3UJV1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc61Q3UJV1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc61Q3UJV1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc61Q3UJV1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc61Q3UJV1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc61Q3UJV1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc61Q3UJV1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc61Q3UJV1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc61Q3UJV1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc61Q3UJV1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.63■□□□□ 0.25
Ccdc61Q3UJV1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm8825-201ENSMUST00000182565 998 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm4518-201ENSMUST00000182638 718 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc61Q3UJV1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Gm8097-201ENSMUST00000117903 829 ntBASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc61Q3UJV1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms