Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC20.38■□□□□ 0.85
Ddb1Q3U1J4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Ddb1Q3U1J4 Gm43438-201ENSMUST00000198133 379 ntBASIC20.38■□□□□ 0.85
Ddb1Q3U1J4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddb1Q3U1J4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddb1Q3U1J4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.38■□□□□ 0.85
Ddb1Q3U1J4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Ddb1Q3U1J4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddb1Q3U1J4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddb1Q3U1J4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ddb1Q3U1J4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddb1Q3U1J4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddb1Q3U1J4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddb1Q3U1J4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ddb1Q3U1J4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddb1Q3U1J4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ddb1Q3U1J4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddb1Q3U1J4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC20.37■□□□□ 0.85
Ddb1Q3U1J4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddb1Q3U1J4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC20.37■□□□□ 0.85
Ddb1Q3U1J4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ddb1Q3U1J4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddb1Q3U1J4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddb1Q3U1J4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ddb1Q3U1J4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddb1Q3U1J4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddb1Q3U1J4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 Rprl2-201ENSMUST00000157150 290 ntBASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 Gm18889-201ENSMUST00000174284 929 ntBASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddb1Q3U1J4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 AC124732.2-201ENSMUST00000221977 316 ntBASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Gm5626-201ENSMUST00000222151 1058 ntBASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Gm5628-201ENSMUST00000222318 1049 ntBASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Arhgef33-209ENSMUST00000225223 714 ntBASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddb1Q3U1J4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.34■□□□□ 0.85
Ddb1Q3U1J4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddb1Q3U1J4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.34■□□□□ 0.85
Ddb1Q3U1J4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddb1Q3U1J4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddb1Q3U1J4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddb1Q3U1J4 Gm22175-201ENSMUST00000175007 78 ntBASIC20.34■□□□□ 0.85
Ddb1Q3U1J4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddb1Q3U1J4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC20.34■□□□□ 0.85
Ddb1Q3U1J4 CT025535.1-201ENSMUST00000227172 491 ntBASIC20.34■□□□□ 0.85
Ddb1Q3U1J4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddb1Q3U1J4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Ddb1Q3U1J4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddb1Q3U1J4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddb1Q3U1J4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddb1Q3U1J4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Ddb1Q3U1J4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 Gm43125-201ENSMUST00000201724 730 ntBASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC20.33■□□□□ 0.85
Ddb1Q3U1J4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms