Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Gm27742-201ENSMUST00000184667 60 ntBASIC17.17■□□□□ 0.34
Trim72Q1XH17 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim72Q1XH17 Gm33142-201ENSMUST00000193913 867 ntBASIC17.17■□□□□ 0.34
Trim72Q1XH17 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim72Q1XH17 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim72Q1XH17 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim72Q1XH17 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim72Q1XH17 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.17■□□□□ 0.34
Trim72Q1XH17 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim72Q1XH17 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim72Q1XH17 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim72Q1XH17 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim72Q1XH17 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim72Q1XH17 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim72Q1XH17 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim72Q1XH17 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim72Q1XH17 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.15■□□□□ 0.34
Trim72Q1XH17 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim72Q1XH17 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim72Q1XH17 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Mir6404-201ENSMUST00000183699 94 ntBASIC17.15■□□□□ 0.34
Trim72Q1XH17 Gm7977-201ENSMUST00000193787 748 ntBASIC17.15■□□□□ 0.34
Trim72Q1XH17 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trim72Q1XH17 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim72Q1XH17 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Trim72Q1XH17 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Gm27704-201ENSMUST00000185094 107 ntBASIC17.14■□□□□ 0.33
Trim72Q1XH17 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.14■□□□□ 0.33
Trim72Q1XH17 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim72Q1XH17 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim72Q1XH17 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim72Q1XH17 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim72Q1XH17 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim72Q1XH17 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Trim72Q1XH17 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim72Q1XH17 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim72Q1XH17 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim72Q1XH17 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim72Q1XH17 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Trim72Q1XH17 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.13■□□□□ 0.33
Trim72Q1XH17 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Trim72Q1XH17 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.13■□□□□ 0.33
Trim72Q1XH17 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.13■□□□□ 0.33
Trim72Q1XH17 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.13■□□□□ 0.33
Trim72Q1XH17 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim72Q1XH17 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim72Q1XH17 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim72Q1XH17 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms