Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ptchd3Q0EEE2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Il3ra-202ENSMUST00000223589 738 ntBASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ptchd3Q0EEE2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ptchd3Q0EEE2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Gm30025-201ENSMUST00000218555 728 ntBASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ptchd3Q0EEE2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptchd3Q0EEE2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms