Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Gm43179-201ENSMUST00000198797 275 ntBASIC14.35□□□□□ -0.11
Chd8Q09XV5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.35□□□□□ -0.11
Chd8Q09XV5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Gm14767-201ENSMUST00000121559 586 ntBASIC14.34□□□□□ -0.11
Chd8Q09XV5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.34□□□□□ -0.11
Chd8Q09XV5 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.34□□□□□ -0.11
Chd8Q09XV5 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.34□□□□□ -0.11
Chd8Q09XV5 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.34□□□□□ -0.11
Chd8Q09XV5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC14.34□□□□□ -0.11
Chd8Q09XV5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd8Q09XV5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chd8Q09XV5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.33□□□□□ -0.11
Chd8Q09XV5 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.33□□□□□ -0.11
Chd8Q09XV5 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chd8Q09XV5 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Chd8Q09XV5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Chd8Q09XV5 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chd8Q09XV5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd8Q09XV5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd8Q09XV5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chd8Q09XV5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.33□□□□□ -0.12
Chd8Q09XV5 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.33□□□□□ -0.12
Chd8Q09XV5 Gm45784-201ENSMUST00000188360 142 ntBASIC14.33□□□□□ -0.12
Chd8Q09XV5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd8Q09XV5 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd8Q09XV5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd8Q09XV5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chd8Q09XV5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Chd8Q09XV5 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.33□□□□□ -0.12
Chd8Q09XV5 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.32□□□□□ -0.12
Chd8Q09XV5 Gm8062-201ENSMUST00000139696 444 ntBASIC14.32□□□□□ -0.12
Chd8Q09XV5 Gm37466-201ENSMUST00000195692 652 ntBASIC14.32□□□□□ -0.12
Chd8Q09XV5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd8Q09XV5 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.32□□□□□ -0.12
Chd8Q09XV5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd8Q09XV5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Chd8Q09XV5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd8Q09XV5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd8Q09XV5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd8Q09XV5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chd8Q09XV5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chd8Q09XV5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd8Q09XV5 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.32□□□□□ -0.12
Chd8Q09XV5 Gm18766-201ENSMUST00000189811 808 ntBASIC14.32□□□□□ -0.12
Chd8Q09XV5 Gm5035-201ENSMUST00000215581 927 ntBASIC14.32□□□□□ -0.12
Chd8Q09XV5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.32□□□□□ -0.12
Chd8Q09XV5 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd8Q09XV5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd8Q09XV5 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Chd8Q09XV5 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Chd8Q09XV5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chd8Q09XV5 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.32□□□□□ -0.12
Chd8Q09XV5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Chd8Q09XV5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chd8Q09XV5 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.32□□□□□ -0.12
Chd8Q09XV5 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms