Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.26■□□□□ 0.19
Ebf1Q07802 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.26■□□□□ 0.19
Ebf1Q07802 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.26■□□□□ 0.19
Ebf1Q07802 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf1Q07802 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf1Q07802 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf1Q07802 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf1Q07802 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf1Q07802 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf1Q07802 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf1Q07802 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.26■□□□□ 0.19
Ebf1Q07802 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ebf1Q07802 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.26■□□□□ 0.19
Ebf1Q07802 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf1Q07802 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf1Q07802 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf1Q07802 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.26■□□□□ 0.19
Ebf1Q07802 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf1Q07802 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf1Q07802 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.26■□□□□ 0.19
Ebf1Q07802 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ebf1Q07802 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Ebf1Q07802 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.25■□□□□ 0.19
Ebf1Q07802 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ebf1Q07802 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ebf1Q07802 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Ebf1Q07802 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.25■□□□□ 0.19
Ebf1Q07802 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Ebf1Q07802 Gm5264-201ENSMUST00000190584 848 ntBASIC16.25■□□□□ 0.19
Ebf1Q07802 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.25■□□□□ 0.19
Ebf1Q07802 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.25■□□□□ 0.19
Ebf1Q07802 Psmb5-202ENSMUST00000227257 622 ntBASIC16.25■□□□□ 0.19
Ebf1Q07802 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ebf1Q07802 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Ebf1Q07802 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Gm13216-201ENSMUST00000117145 591 ntBASIC16.24■□□□□ 0.19
Ebf1Q07802 Gm11779-201ENSMUST00000118541 368 ntBASIC16.24■□□□□ 0.19
Ebf1Q07802 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.24■□□□□ 0.19
Ebf1Q07802 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ebf1Q07802 Gm7230-201ENSMUST00000173026 815 ntBASIC16.24■□□□□ 0.19
Ebf1Q07802 Gm25745-201ENSMUST00000174945 133 ntBASIC16.24■□□□□ 0.19
Ebf1Q07802 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.24■□□□□ 0.19
Ebf1Q07802 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Ebf1Q07802 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.24■□□□□ 0.19
Ebf1Q07802 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.24■□□□□ 0.19
Ebf1Q07802 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.24■□□□□ 0.19
Ebf1Q07802 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
Ebf1Q07802 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebf1Q07802 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf1Q07802 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf1Q07802 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf1Q07802 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf1Q07802 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf1Q07802 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf1Q07802 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Ebf1Q07802 Gm25990-201ENSMUST00000102440 86 ntBASIC16.23■□□□□ 0.19
Ebf1Q07802 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Ebf1Q07802 Gm4535-201ENSMUST00000182274 558 ntBASIC16.23■□□□□ 0.19
Ebf1Q07802 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.23■□□□□ 0.19
Ebf1Q07802 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ebf1Q07802 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.23■□□□□ 0.19
Ebf1Q07802 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms