Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smn1P97801 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smn1P97801 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Smn1P97801 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Smn1P97801 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.82□□□□□ -0.2
Smn1P97801 Mir1199-201ENSMUST00000117015 119 ntBASIC13.82□□□□□ -0.2
Smn1P97801 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.82□□□□□ -0.2
Smn1P97801 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.82□□□□□ -0.2
Smn1P97801 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Smn1P97801 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.82□□□□□ -0.2
Smn1P97801 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.82□□□□□ -0.2
Smn1P97801 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Smn1P97801 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smn1P97801 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Smn1P97801 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Smn1P97801 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smn1P97801 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.81□□□□□ -0.2
Smn1P97801 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.81□□□□□ -0.2
Smn1P97801 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.81□□□□□ -0.2
Smn1P97801 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.81□□□□□ -0.2
Smn1P97801 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.81□□□□□ -0.2
Smn1P97801 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Smn1P97801 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.81□□□□□ -0.2
Smn1P97801 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.81□□□□□ -0.2
Smn1P97801 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smn1P97801 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 Gm13186-201ENSMUST00000118031 316 ntBASIC13.8□□□□□ -0.2
Smn1P97801 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Smn1P97801 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.8□□□□□ -0.2
Smn1P97801 Timm23-208ENSMUST00000226683 750 ntBASIC13.8□□□□□ -0.2
Smn1P97801 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Smn1P97801 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.8□□□□□ -0.2
Smn1P97801 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.8□□□□□ -0.2
Smn1P97801 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Smn1P97801 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Smn1P97801 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Smn1P97801 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smn1P97801 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Smn1P97801 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Smn1P97801 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms