Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.18■□□□□ 0.02
Nkx3-2P97503 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx3-2P97503 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.17■□□□□ 0.02
Nkx3-2P97503 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Gm44454-201ENSMUST00000198541 138 ntBASIC15.17■□□□□ 0.02
Nkx3-2P97503 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nkx3-2P97503 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.17■□□□□ 0.02
Nkx3-2P97503 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.17■□□□□ 0.02
Nkx3-2P97503 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx3-2P97503 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.16■□□□□ 0.02
Nkx3-2P97503 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Gm43347-201ENSMUST00000200226 580 ntBASIC15.16■□□□□ 0.02
Nkx3-2P97503 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nkx3-2P97503 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.15■□□□□ 0.02
Nkx3-2P97503 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx3-2P97503 Gm28659-201ENSMUST00000188013 759 ntBASIC15.15■□□□□ 0.02
Nkx3-2P97503 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms