Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Smarcc1P97496 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Smarcc1P97496 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc1P97496 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc1P97496 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc1P97496 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Smarcc1P97496 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc1P97496 Gm44492-201ENSMUST00000197012 141 ntBASIC20.06■□□□□ 0.8
Smarcc1P97496 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Smarcc1P97496 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc1P97496 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc1P97496 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc1P97496 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc1P97496 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc1P97496 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc1P97496 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc1P97496 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc1P97496 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc1P97496 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcc1P97496 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Smarcc1P97496 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc1P97496 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.05■□□□□ 0.8
Smarcc1P97496 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc1P97496 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Smarcc1P97496 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc1P97496 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc1P97496 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc1P97496 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Smarcc1P97496 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc1P97496 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc1P97496 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc1P97496 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc1P97496 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.05■□□□□ 0.8
Smarcc1P97496 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.05■□□□□ 0.8
Smarcc1P97496 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smarcc1P97496 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Smarcc1P97496 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Smarcc1P97496 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Smarcc1P97496 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Gm11185-201ENSMUST00000117732 1007 ntBASIC20.04■□□□□ 0.8
Smarcc1P97496 Gm8344-201ENSMUST00000119813 856 ntBASIC20.04■□□□□ 0.8
Smarcc1P97496 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Mir6956-201ENSMUST00000183598 62 ntBASIC20.04■□□□□ 0.8
Smarcc1P97496 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC20.04■□□□□ 0.8
Smarcc1P97496 AC093926.2-201ENSMUST00000214468 1228 ntBASIC20.04■□□□□ 0.8
Smarcc1P97496 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 AC154572.2-201ENSMUST00000225105 997 ntBASIC20.04■□□□□ 0.8
Smarcc1P97496 AC147366.1-201ENSMUST00000227671 852 ntBASIC20.04■□□□□ 0.8
Smarcc1P97496 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC20.04■□□□□ 0.8
Smarcc1P97496 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Smarcc1P97496 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Smarcc1P97496 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.04■□□□□ 0.8
Smarcc1P97496 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smarcc1P97496 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc1P97496 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc1P97496 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc1P97496 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc1P97496 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC20.03■□□□□ 0.8
Smarcc1P97496 Gm37171-201ENSMUST00000192636 1185 ntBASIC20.03■□□□□ 0.8
Smarcc1P97496 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC20.03■□□□□ 0.8
Smarcc1P97496 AC139382.1-201ENSMUST00000221402 498 ntBASIC20.03■□□□□ 0.8
Smarcc1P97496 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc1P97496 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc1P97496 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc1P97496 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smarcc1P97496 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Smarcc1P97496 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcc1P97496 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcc1P97496 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcc1P97496 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.02■□□□□ 0.8
Smarcc1P97496 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcc1P97496 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC20.02■□□□□ 0.8
Smarcc1P97496 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcc1P97496 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20.02■□□□□ 0.8
Smarcc1P97496 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcc1P97496 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcc1P97496 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcc1P97496 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcc1P97496 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcc1P97496 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcc1P97496 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smarcc1P97496 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smarcc1P97496 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smarcc1P97496 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms