Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pkp1P97350 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pkp1P97350 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pkp1P97350 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Pkp1P97350 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp1P97350 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp1P97350 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp1P97350 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp1P97350 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp1P97350 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp1P97350 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pkp1P97350 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.82■□□□□ 0.6
Pkp1P97350 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp1P97350 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp1P97350 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp1P97350 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp1P97350 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp1P97350 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.82■□□□□ 0.6
Pkp1P97350 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.82■□□□□ 0.6
Pkp1P97350 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp1P97350 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.82■□□□□ 0.6
Pkp1P97350 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pkp1P97350 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkp1P97350 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp1P97350 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp1P97350 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp1P97350 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp1P97350 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp1P97350 Olfr129-201ENSMUST00000122318 993 ntBASIC18.81■□□□□ 0.6
Pkp1P97350 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp1P97350 Gm25016-201ENSMUST00000158399 131 ntBASIC18.81■□□□□ 0.6
Pkp1P97350 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.81■□□□□ 0.6
Pkp1P97350 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp1P97350 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Pkp1P97350 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp1P97350 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp1P97350 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp1P97350 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp1P97350 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkp1P97350 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp1P97350 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Pkp1P97350 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp1P97350 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp1P97350 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp1P97350 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp1P97350 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.8■□□□□ 0.6
Pkp1P97350 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp1P97350 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pkp1P97350 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp1P97350 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp1P97350 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp1P97350 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pkp1P97350 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pkp1P97350 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp1P97350 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp1P97350 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pkp1P97350 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkp1P97350 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp1P97350 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp1P97350 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp1P97350 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp1P97350 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.79■□□□□ 0.6
Pkp1P97350 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.79■□□□□ 0.6
Pkp1P97350 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp1P97350 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Pkp1P97350 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.79■□□□□ 0.6
Pkp1P97350 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp1P97350 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp1P97350 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp1P97350 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pkp1P97350 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp1P97350 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pkp1P97350 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp1P97350 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp1P97350 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkp1P97350 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.78■□□□□ 0.6
Pkp1P97350 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp1P97350 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp1P97350 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.78■□□□□ 0.6
Pkp1P97350 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Pkp1P97350 Gm45328-201ENSMUST00000210942 917 ntBASIC18.78■□□□□ 0.6
Pkp1P97350 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp1P97350 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Pkp1P97350 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp1P97350 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp1P97350 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp1P97350 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp1P97350 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp1P97350 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp1P97350 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pkp1P97350 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pkp1P97350 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pkp1P97350 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pkp1P97350 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pkp1P97350 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.77■□□□□ 0.6
Pkp1P97350 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pkp1P97350 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pkp1P97350 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pkp1P97350 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pkp1P97350 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms