Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PrkdcP97313 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
PrkdcP97313 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
PrkdcP97313 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PrkdcP97313 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
PrkdcP97313 Gm12008-201ENSMUST00000117791 755 ntBASIC10.94□□□□□ -0.66
PrkdcP97313 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 Mir1938-201ENSMUST00000158746 100 ntBASIC10.94□□□□□ -0.66
PrkdcP97313 Mir3547-201ENSMUST00000175461 88 ntBASIC10.94□□□□□ -0.66
PrkdcP97313 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
PrkdcP97313 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
PrkdcP97313 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
PrkdcP97313 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
PrkdcP97313 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.94□□□□□ -0.66
PrkdcP97313 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC10.94□□□□□ -0.66
PrkdcP97313 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC10.94□□□□□ -0.66
PrkdcP97313 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
PrkdcP97313 Gm16198-201ENSMUST00000118766 670 ntBASIC10.94□□□□□ -0.66
PrkdcP97313 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.94□□□□□ -0.66
PrkdcP97313 Gm6888-201ENSMUST00000221983 706 ntBASIC10.94□□□□□ -0.66
PrkdcP97313 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 AC132265.1-201ENSMUST00000219233 1665 ntBASIC10.94□□□□□ -0.66
PrkdcP97313 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
PrkdcP97313 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC10.94□□□□□ -0.66
PrkdcP97313 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.94□□□□□ -0.66
PrkdcP97313 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PrkdcP97313 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PrkdcP97313 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
PrkdcP97313 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PrkdcP97313 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PrkdcP97313 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PrkdcP97313 Gm42939-201ENSMUST00000197514 2205 ntBASIC10.93□□□□□ -0.66
PrkdcP97313 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PrkdcP97313 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PrkdcP97313 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.93□□□□□ -0.66
PrkdcP97313 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PrkdcP97313 Gm23984-201ENSMUST00000157139 203 ntBASIC10.93□□□□□ -0.66
PrkdcP97313 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PrkdcP97313 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.93□□□□□ -0.66
PrkdcP97313 Gm11620-201ENSMUST00000118770 1845 ntBASIC10.93□□□□□ -0.66
PrkdcP97313 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PrkdcP97313 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PrkdcP97313 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC10.93□□□□□ -0.66
PrkdcP97313 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.93□□□□□ -0.66
PrkdcP97313 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.93□□□□□ -0.66
PrkdcP97313 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.93□□□□□ -0.66
PrkdcP97313 Gm6745-201ENSMUST00000199216 526 ntBASIC10.93□□□□□ -0.66
PrkdcP97313 Gm45331-201ENSMUST00000209868 554 ntBASIC10.93□□□□□ -0.66
PrkdcP97313 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.93□□□□□ -0.66
PrkdcP97313 Syt7-204ENSMUST00000223586 1344 ntBASIC10.93□□□□□ -0.66
PrkdcP97313 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PrkdcP97313 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PrkdcP97313 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.93□□□□□ -0.66
PrkdcP97313 Gm6266-201ENSMUST00000203844 806 ntBASIC10.93□□□□□ -0.66
PrkdcP97313 Gm7787-201ENSMUST00000216858 688 ntBASIC10.93□□□□□ -0.66
PrkdcP97313 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC10.93□□□□□ -0.66
PrkdcP97313 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.93□□□□□ -0.66
PrkdcP97313 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
PrkdcP97313 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PrkdcP97313 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PrkdcP97313 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PrkdcP97313 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.92□□□□□ -0.66
PrkdcP97313 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.92□□□□□ -0.66
PrkdcP97313 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.92□□□□□ -0.66
PrkdcP97313 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
PrkdcP97313 Gm37519-201ENSMUST00000191687 2210 ntBASIC10.92□□□□□ -0.66
PrkdcP97313 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
PrkdcP97313 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PrkdcP97313 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PrkdcP97313 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PrkdcP97313 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC10.92□□□□□ -0.66
PrkdcP97313 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
PrkdcP97313 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PrkdcP97313 Syt7-205ENSMUST00000224135 1557 ntBASIC10.92□□□□□ -0.66
PrkdcP97313 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PrkdcP97313 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
PrkdcP97313 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PrkdcP97313 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC10.92□□□□□ -0.66
PrkdcP97313 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC10.92□□□□□ -0.66
PrkdcP97313 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.92□□□□□ -0.66
PrkdcP97313 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
PrkdcP97313 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.92□□□□□ -0.66
PrkdcP97313 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PrkdcP97313 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PrkdcP97313 Zcchc6-207ENSMUST00000225576 2499 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms