Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.32□□□□□ -0.12
H3f3aP84244 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
H3f3aP84244 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
H3f3aP84244 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3aP84244 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
H3f3aP84244 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
H3f3aP84244 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
H3f3aP84244 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Gm17807-201ENSMUST00000186869 298 ntBASIC14.31□□□□□ -0.12
H3f3aP84244 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.31□□□□□ -0.12
H3f3aP84244 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
H3f3aP84244 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.31□□□□□ -0.12
H3f3aP84244 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
H3f3aP84244 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3aP84244 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
H3f3aP84244 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
H3f3aP84244 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
H3f3aP84244 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
H3f3aP84244 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.3□□□□□ -0.12
H3f3aP84244 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.3□□□□□ -0.12
H3f3aP84244 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.3□□□□□ -0.12
H3f3aP84244 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.3□□□□□ -0.12
H3f3aP84244 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.3□□□□□ -0.12
H3f3aP84244 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3aP84244 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.29□□□□□ -0.12
H3f3aP84244 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
H3f3aP84244 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.29□□□□□ -0.12
H3f3aP84244 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.29□□□□□ -0.12
H3f3aP84244 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 Mir6404-201ENSMUST00000183699 94 ntBASIC14.29□□□□□ -0.12
H3f3aP84244 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.29□□□□□ -0.12
H3f3aP84244 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.29□□□□□ -0.12
H3f3aP84244 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.29□□□□□ -0.12
H3f3aP84244 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
H3f3aP84244 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3aP84244 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms