Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shox2P70390 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shox2P70390 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shox2P70390 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shox2P70390 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shox2P70390 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shox2P70390 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shox2P70390 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shox2P70390 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shox2P70390 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shox2P70390 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Shox2P70390 Gm36967-201ENSMUST00000193814 266 ntBASIC15.96■□□□□ 0.15
Shox2P70390 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.96■□□□□ 0.15
Shox2P70390 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.96■□□□□ 0.15
Shox2P70390 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Shox2P70390 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shox2P70390 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shox2P70390 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shox2P70390 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shox2P70390 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Shox2P70390 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.96■□□□□ 0.15
Shox2P70390 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Shox2P70390 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Shox2P70390 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Shox2P70390 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.14
Shox2P70390 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Shox2P70390 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Shox2P70390 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shox2P70390 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shox2P70390 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Shox2P70390 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shox2P70390 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shox2P70390 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.95■□□□□ 0.14
Shox2P70390 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Shox2P70390 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Shox2P70390 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.95■□□□□ 0.14
Shox2P70390 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.95■□□□□ 0.14
Shox2P70390 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Shox2P70390 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shox2P70390 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Shox2P70390 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shox2P70390 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shox2P70390 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shox2P70390 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shox2P70390 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shox2P70390 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shox2P70390 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.95■□□□□ 0.14
Shox2P70390 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Shox2P70390 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Shox2P70390 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.95■□□□□ 0.14
Shox2P70390 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.94■□□□□ 0.14
Shox2P70390 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.94■□□□□ 0.14
Shox2P70390 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 Gm12382-201ENSMUST00000122005 922 ntBASIC15.94■□□□□ 0.14
Shox2P70390 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.94■□□□□ 0.14
Shox2P70390 Gm2559-201ENSMUST00000201323 363 ntBASIC15.94■□□□□ 0.14
Shox2P70390 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.94■□□□□ 0.14
Shox2P70390 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.94■□□□□ 0.14
Shox2P70390 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.94■□□□□ 0.14
Shox2P70390 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Shox2P70390 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Shox2P70390 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Shox2P70390 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shox2P70390 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shox2P70390 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Shox2P70390 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Shox2P70390 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.93■□□□□ 0.14
Shox2P70390 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Shox2P70390 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shox2P70390 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shox2P70390 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Shox2P70390 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shox2P70390 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shox2P70390 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Shox2P70390 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.93■□□□□ 0.14
Shox2P70390 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Shox2P70390 AV356131-201ENSMUST00000206201 750 ntBASIC15.93■□□□□ 0.14
Shox2P70390 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.93■□□□□ 0.14
Shox2P70390 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Shox2P70390 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shox2P70390 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.93■□□□□ 0.14
Shox2P70390 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Shox2P70390 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Shox2P70390 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms