Protein–RNA interactions for Protein: P68433

Hist1h3a, Histone H3.1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3aP68433 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hist1h3aP68433 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Hist1h3aP68433 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hist1h3aP68433 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Gm29518-201ENSMUST00000190858 372 ntBASIC14.03□□□□□ -0.16
Hist1h3aP68433 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3aP68433 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3aP68433 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3aP68433 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Hist1h3aP68433 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3aP68433 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3aP68433 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3aP68433 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3aP68433 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3aP68433 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3aP68433 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3aP68433 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Gm45328-201ENSMUST00000210942 917 ntBASIC14.02□□□□□ -0.17
Hist1h3aP68433 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3aP68433 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3aP68433 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Dancr-204ENSMUST00000132389 2347 ntBASIC14.01□□□□□ -0.17
Hist1h3aP68433 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.01□□□□□ -0.17
Hist1h3aP68433 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.01□□□□□ -0.17
Hist1h3aP68433 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.01□□□□□ -0.17
Hist1h3aP68433 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Gm17808-201ENSMUST00000200859 894 ntBASIC14.01□□□□□ -0.17
Hist1h3aP68433 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3aP68433 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3aP68433 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3aP68433 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3aP68433 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14□□□□□ -0.17
Hist1h3aP68433 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3aP68433 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3aP68433 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Hist1h3aP68433 AA414768-201ENSMUST00000121924 1257 ntBASIC14□□□□□ -0.17
Hist1h3aP68433 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3aP68433 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3aP68433 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3aP68433 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3aP68433 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3aP68433 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms