Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Gm28033-201ENSMUST00000184224 96 ntBASIC19.73■□□□□ 0.75
Tm6sf1P58749 Gm27867-201ENSMUST00000184778 125 ntBASIC19.73■□□□□ 0.75
Tm6sf1P58749 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Tm6sf1P58749 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.73■□□□□ 0.75
Tm6sf1P58749 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.73■□□□□ 0.75
Tm6sf1P58749 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.73■□□□□ 0.75
Tm6sf1P58749 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tm6sf1P58749 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tm6sf1P58749 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tm6sf1P58749 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tm6sf1P58749 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.72■□□□□ 0.75
Tm6sf1P58749 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tm6sf1P58749 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tm6sf1P58749 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Tm6sf1P58749 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Tm6sf1P58749 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tm6sf1P58749 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Tm6sf1P58749 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tm6sf1P58749 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Tm6sf1P58749 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.72■□□□□ 0.75
Tm6sf1P58749 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tm6sf1P58749 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tm6sf1P58749 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tm6sf1P58749 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tm6sf1P58749 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tm6sf1P58749 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tm6sf1P58749 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tm6sf1P58749 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.71■□□□□ 0.75
Tm6sf1P58749 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tm6sf1P58749 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tm6sf1P58749 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tm6sf1P58749 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.71■□□□□ 0.75
Tm6sf1P58749 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tm6sf1P58749 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Tm6sf1P58749 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tm6sf1P58749 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tm6sf1P58749 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tm6sf1P58749 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tm6sf1P58749 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tm6sf1P58749 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tm6sf1P58749 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tm6sf1P58749 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tm6sf1P58749 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tm6sf1P58749 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tm6sf1P58749 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tm6sf1P58749 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.7■□□□□ 0.74
Tm6sf1P58749 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tm6sf1P58749 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tm6sf1P58749 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tm6sf1P58749 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tm6sf1P58749 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.69■□□□□ 0.74
Tm6sf1P58749 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tm6sf1P58749 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tm6sf1P58749 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tm6sf1P58749 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tm6sf1P58749 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tm6sf1P58749 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tm6sf1P58749 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tm6sf1P58749 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.69■□□□□ 0.74
Tm6sf1P58749 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.69■□□□□ 0.74
Tm6sf1P58749 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.69■□□□□ 0.74
Tm6sf1P58749 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tm6sf1P58749 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Tm6sf1P58749 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tm6sf1P58749 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Tm6sf1P58749 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tm6sf1P58749 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Tm6sf1P58749 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.68■□□□□ 0.74
Tm6sf1P58749 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tm6sf1P58749 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tm6sf1P58749 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tm6sf1P58749 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tm6sf1P58749 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Tm6sf1P58749 Gm25745-201ENSMUST00000174945 133 ntBASIC19.68■□□□□ 0.74
Tm6sf1P58749 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tm6sf1P58749 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tm6sf1P58749 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tm6sf1P58749 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tm6sf1P58749 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tm6sf1P58749 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Gm9172-201ENSMUST00000212092 954 ntBASIC19.67■□□□□ 0.74
Tm6sf1P58749 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tm6sf1P58749 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Tm6sf1P58749 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms