Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nfkb1P25799 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nfkb1P25799 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nfkb1P25799 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.49■□□□□ 0.23
Nfkb1P25799 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nfkb1P25799 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.49■□□□□ 0.23
Nfkb1P25799 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nfkb1P25799 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nfkb1P25799 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nfkb1P25799 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nfkb1P25799 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nfkb1P25799 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Nfkb1P25799 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nfkb1P25799 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nfkb1P25799 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nfkb1P25799 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nfkb1P25799 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Nfkb1P25799 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nfkb1P25799 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Nfkb1P25799 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Gm13418-201ENSMUST00000119097 944 ntBASIC16.48■□□□□ 0.23
Nfkb1P25799 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Gm10060-201ENSMUST00000212002 111 ntBASIC16.48■□□□□ 0.23
Nfkb1P25799 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.48■□□□□ 0.23
Nfkb1P25799 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Nfkb1P25799 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.48■□□□□ 0.23
Nfkb1P25799 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Nfkb1P25799 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.48■□□□□ 0.23
Nfkb1P25799 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.48■□□□□ 0.23
Nfkb1P25799 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nfkb1P25799 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nfkb1P25799 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nfkb1P25799 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nfkb1P25799 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nfkb1P25799 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nfkb1P25799 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nfkb1P25799 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nfkb1P25799 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nfkb1P25799 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nfkb1P25799 Gm4459-201ENSMUST00000118750 468 ntBASIC16.47■□□□□ 0.23
Nfkb1P25799 Gm4535-201ENSMUST00000182274 558 ntBASIC16.47■□□□□ 0.23
Nfkb1P25799 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.47■□□□□ 0.23
Nfkb1P25799 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.47■□□□□ 0.23
Nfkb1P25799 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.47■□□□□ 0.23
Nfkb1P25799 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.47■□□□□ 0.23
Nfkb1P25799 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nfkb1P25799 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nfkb1P25799 Gm10355-201ENSMUST00000097146 517 ntBASIC16.47■□□□□ 0.23
Nfkb1P25799 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.47■□□□□ 0.23
Nfkb1P25799 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nfkb1P25799 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nfkb1P25799 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.47■□□□□ 0.23
Nfkb1P25799 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nfkb1P25799 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Nfkb1P25799 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nfkb1P25799 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nfkb1P25799 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nfkb1P25799 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Nfkb1P25799 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Nfkb1P25799 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nfkb1P25799 Gm12497-201ENSMUST00000138778 237 ntBASIC16.46■□□□□ 0.23
Nfkb1P25799 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nfkb1P25799 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nfkb1P25799 Gm25406-201ENSMUST00000157599 105 ntBASIC16.46■□□□□ 0.23
Nfkb1P25799 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Nfkb1P25799 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nfkb1P25799 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nfkb1P25799 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Nfkb1P25799 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.46■□□□□ 0.23
Nfkb1P25799 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nfkb1P25799 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nfkb1P25799 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nfkb1P25799 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.46■□□□□ 0.23
Nfkb1P25799 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nfkb1P25799 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nfkb1P25799 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nfkb1P25799 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nfkb1P25799 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Nfkb1P25799 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.46■□□□□ 0.22
Nfkb1P25799 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nfkb1P25799 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nfkb1P25799 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms