Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6bP23440 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6bP23440 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6bP23440 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.52■□□□□ 0.4
Pde6bP23440 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6bP23440 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6bP23440 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pde6bP23440 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pde6bP23440 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.52■□□□□ 0.39
Pde6bP23440 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pde6bP23440 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pde6bP23440 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.52■□□□□ 0.39
Pde6bP23440 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pde6bP23440 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Pde6bP23440 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pde6bP23440 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pde6bP23440 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pde6bP23440 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.51■□□□□ 0.39
Pde6bP23440 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.51■□□□□ 0.39
Pde6bP23440 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.51■□□□□ 0.39
Pde6bP23440 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.51■□□□□ 0.39
Pde6bP23440 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.51■□□□□ 0.39
Pde6bP23440 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.51■□□□□ 0.39
Pde6bP23440 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pde6bP23440 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pde6bP23440 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6bP23440 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.5■□□□□ 0.39
Pde6bP23440 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.5■□□□□ 0.39
Pde6bP23440 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.5■□□□□ 0.39
Pde6bP23440 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pde6bP23440 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Pde6bP23440 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.5■□□□□ 0.39
Pde6bP23440 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.5■□□□□ 0.39
Pde6bP23440 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6bP23440 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6bP23440 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6bP23440 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pde6bP23440 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pde6bP23440 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6bP23440 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6bP23440 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6bP23440 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.49■□□□□ 0.39
Pde6bP23440 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.49■□□□□ 0.39
Pde6bP23440 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.49■□□□□ 0.39
Pde6bP23440 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.49■□□□□ 0.39
Pde6bP23440 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.49■□□□□ 0.39
Pde6bP23440 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6bP23440 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6bP23440 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6bP23440 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pde6bP23440 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pde6bP23440 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6bP23440 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6bP23440 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6bP23440 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6bP23440 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6bP23440 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Pde6bP23440 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms