Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.43■□□□□ 0.22
Rb1P13405 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rb1P13405 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rb1P13405 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.43■□□□□ 0.22
Rb1P13405 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.43■□□□□ 0.22
Rb1P13405 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.43■□□□□ 0.22
Rb1P13405 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rb1P13405 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rb1P13405 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rb1P13405 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rb1P13405 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.43■□□□□ 0.22
Rb1P13405 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rb1P13405 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rb1P13405 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rb1P13405 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rb1P13405 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.42■□□□□ 0.22
Rb1P13405 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.42■□□□□ 0.22
Rb1P13405 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Gm27000-201ENSMUST00000182943 842 ntBASIC16.42■□□□□ 0.22
Rb1P13405 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.42■□□□□ 0.22
Rb1P13405 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Rb1P13405 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.42■□□□□ 0.22
Rb1P13405 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Rb1P13405 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rb1P13405 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.42■□□□□ 0.22
Rb1P13405 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.42■□□□□ 0.22
Rb1P13405 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rb1P13405 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.41■□□□□ 0.22
Rb1P13405 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.41■□□□□ 0.22
Rb1P13405 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.41■□□□□ 0.22
Rb1P13405 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.41■□□□□ 0.22
Rb1P13405 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.41■□□□□ 0.22
Rb1P13405 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rb1P13405 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rb1P13405 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rb1P13405 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rb1P13405 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.4■□□□□ 0.22
Rb1P13405 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.4■□□□□ 0.22
Rb1P13405 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rb1P13405 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms