Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd4P10628 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxd4P10628 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd4P10628 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxd4P10628 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd4P10628 Gm37856-201ENSMUST00000191634 999 ntBASIC14.45□□□□□ -0.1
Hoxd4P10628 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxd4P10628 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxd4P10628 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxd4P10628 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd4P10628 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.45□□□□□ -0.1
Hoxd4P10628 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd4P10628 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.45□□□□□ -0.1
Hoxd4P10628 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd4P10628 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd4P10628 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd4P10628 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd4P10628 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.45□□□□□ -0.1
Hoxd4P10628 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd4P10628 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd4P10628 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.44□□□□□ -0.1
Hoxd4P10628 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxd4P10628 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxd4P10628 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hoxd4P10628 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.44□□□□□ -0.1
Hoxd4P10628 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.44□□□□□ -0.1
Hoxd4P10628 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxd4P10628 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.44□□□□□ -0.1
Hoxd4P10628 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hoxd4P10628 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxd4P10628 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.44□□□□□ -0.1
Hoxd4P10628 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd4P10628 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hoxd4P10628 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hoxd4P10628 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxd4P10628 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxd4P10628 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.43□□□□□ -0.1
Hoxd4P10628 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.43□□□□□ -0.1
Hoxd4P10628 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.43□□□□□ -0.1
Hoxd4P10628 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Hoxd4P10628 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Hoxd4P10628 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd4P10628 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.42□□□□□ -0.1
Hoxd4P10628 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd4P10628 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd4P10628 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Hoxd4P10628 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd4P10628 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Hoxd4P10628 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd4P10628 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hoxd4P10628 Gm10252-201ENSMUST00000209541 832 ntBASIC14.42□□□□□ -0.1
Hoxd4P10628 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd4P10628 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd4P10628 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hoxd4P10628 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd4P10628 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.42□□□□□ -0.1
Hoxd4P10628 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd4P10628 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxd4P10628 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms