Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NeflP08551 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NeflP08551 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NeflP08551 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NeflP08551 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NeflP08551 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
NeflP08551 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NeflP08551 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NeflP08551 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NeflP08551 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NeflP08551 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NeflP08551 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NeflP08551 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.95■□□□□ 0.94
NeflP08551 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NeflP08551 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NeflP08551 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NeflP08551 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NeflP08551 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NeflP08551 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NeflP08551 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NeflP08551 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NeflP08551 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NeflP08551 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NeflP08551 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NeflP08551 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NeflP08551 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NeflP08551 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.94■□□□□ 0.94
NeflP08551 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NeflP08551 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NeflP08551 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NeflP08551 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NeflP08551 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NeflP08551 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NeflP08551 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NeflP08551 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NeflP08551 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NeflP08551 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.94■□□□□ 0.94
NeflP08551 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NeflP08551 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NeflP08551 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NeflP08551 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NeflP08551 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NeflP08551 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NeflP08551 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NeflP08551 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NeflP08551 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NeflP08551 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NeflP08551 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NeflP08551 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.93■□□□□ 0.94
NeflP08551 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NeflP08551 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NeflP08551 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NeflP08551 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NeflP08551 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
NeflP08551 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NeflP08551 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.93■□□□□ 0.94
NeflP08551 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NeflP08551 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NeflP08551 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NeflP08551 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NeflP08551 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
NeflP08551 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NeflP08551 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NeflP08551 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.92■□□□□ 0.94
NeflP08551 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NeflP08551 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.92■□□□□ 0.94
NeflP08551 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.92■□□□□ 0.94
NeflP08551 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NeflP08551 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NeflP08551 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NeflP08551 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NeflP08551 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NeflP08551 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.92■□□□□ 0.94
NeflP08551 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NeflP08551 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NeflP08551 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NeflP08551 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NeflP08551 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
NeflP08551 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NeflP08551 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NeflP08551 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
NeflP08551 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NeflP08551 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.91■□□□□ 0.94
NeflP08551 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NeflP08551 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NeflP08551 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NeflP08551 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NeflP08551 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC20.91■□□□□ 0.94
NeflP08551 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NeflP08551 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.91■□□□□ 0.94
NeflP08551 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.91■□□□□ 0.94
NeflP08551 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NeflP08551 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NeflP08551 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NeflP08551 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
NeflP08551 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NeflP08551 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.91■□□□□ 0.94
NeflP08551 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NeflP08551 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NeflP08551 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms