Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.1■□□□□ 0.65
Col3a1P08121 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.1■□□□□ 0.65
Col3a1P08121 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.1■□□□□ 0.65
Col3a1P08121 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col3a1P08121 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col3a1P08121 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col3a1P08121 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col3a1P08121 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col3a1P08121 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.1■□□□□ 0.65
Col3a1P08121 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Col3a1P08121 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Col3a1P08121 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col3a1P08121 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col3a1P08121 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.09■□□□□ 0.65
Col3a1P08121 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Col3a1P08121 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.09■□□□□ 0.65
Col3a1P08121 Gm18489-201ENSMUST00000172565 551 ntBASIC19.09■□□□□ 0.65
Col3a1P08121 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.09■□□□□ 0.65
Col3a1P08121 Gm4899-201ENSMUST00000178708 719 ntBASIC19.09■□□□□ 0.65
Col3a1P08121 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19.09■□□□□ 0.65
Col3a1P08121 Gm9682-201ENSMUST00000197505 556 ntBASIC19.09■□□□□ 0.65
Col3a1P08121 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.09■□□□□ 0.65
Col3a1P08121 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19.09■□□□□ 0.65
Col3a1P08121 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.09■□□□□ 0.65
Col3a1P08121 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col3a1P08121 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col3a1P08121 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col3a1P08121 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col3a1P08121 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col3a1P08121 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col3a1P08121 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col3a1P08121 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col3a1P08121 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col3a1P08121 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col3a1P08121 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col3a1P08121 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col3a1P08121 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Col3a1P08121 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col3a1P08121 Gm27300-201ENSMUST00000184085 97 ntBASIC19.09■□□□□ 0.65
Col3a1P08121 Gm27335-201ENSMUST00000184758 97 ntBASIC19.09■□□□□ 0.65
Col3a1P08121 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col3a1P08121 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.09■□□□□ 0.65
Col3a1P08121 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col3a1P08121 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col3a1P08121 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.08■□□□□ 0.65
Col3a1P08121 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col3a1P08121 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col3a1P08121 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Col3a1P08121 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col3a1P08121 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col3a1P08121 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col3a1P08121 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col3a1P08121 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col3a1P08121 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Col3a1P08121 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.08■□□□□ 0.64
Col3a1P08121 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.08■□□□□ 0.64
Col3a1P08121 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col3a1P08121 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Col3a1P08121 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col3a1P08121 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col3a1P08121 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col3a1P08121 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col3a1P08121 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col3a1P08121 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col3a1P08121 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col3a1P08121 Mir8117-201ENSMUST00000184773 107 ntBASIC19.07■□□□□ 0.64
Col3a1P08121 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.07■□□□□ 0.64
Col3a1P08121 Gm45167-201ENSMUST00000208007 322 ntBASIC19.07■□□□□ 0.64
Col3a1P08121 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col3a1P08121 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col3a1P08121 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col3a1P08121 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col3a1P08121 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col3a1P08121 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col3a1P08121 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col3a1P08121 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col3a1P08121 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.06■□□□□ 0.64
Col3a1P08121 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col3a1P08121 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Col3a1P08121 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col3a1P08121 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Col3a1P08121 Gm43575-201ENSMUST00000196420 516 ntBASIC19.06■□□□□ 0.64
Col3a1P08121 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col3a1P08121 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.06■□□□□ 0.64
Col3a1P08121 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Col3a1P08121 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Col3a1P08121 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col3a1P08121 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.06■□□□□ 0.64
Col3a1P08121 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col3a1P08121 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col3a1P08121 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col3a1P08121 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col3a1P08121 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col3a1P08121 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col3a1P08121 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.05■□□□□ 0.64
Col3a1P08121 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col3a1P08121 Gm13597-201ENSMUST00000121239 375 ntBASIC19.05■□□□□ 0.64
Col3a1P08121 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.05■□□□□ 0.64
Col3a1P08121 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col3a1P08121 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms