Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.8□□□□□ -0.52
P06328 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
P06328 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06328 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
P06328 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06328 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06328 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
P06328 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.8□□□□□ -0.52
P06328 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06328 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06328 Gm27011-201ENSMUST00000182352 972 ntBASIC11.8□□□□□ -0.52
P06328 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC11.8□□□□□ -0.52
P06328 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06328 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06328 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06328 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06328 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06328 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
P06328 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06328 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06328 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
P06328 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06328 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
P06328 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.79□□□□□ -0.52
P06328 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
P06328 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.79□□□□□ -0.52
P06328 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.79□□□□□ -0.52
P06328 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.79□□□□□ -0.52
P06328 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
P06328 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.79□□□□□ -0.52
P06328 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
P06328 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
P06328 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06328 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
P06328 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.78□□□□□ -0.52
P06328 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.78□□□□□ -0.52
P06328 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
P06328 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.78□□□□□ -0.52
P06328 Gm13436-201ENSMUST00000120418 567 ntBASIC11.78□□□□□ -0.52
P06328 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.78□□□□□ -0.52
P06328 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Gm37055-201ENSMUST00000191866 133 ntBASIC11.78□□□□□ -0.52
P06328 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.78□□□□□ -0.52
P06328 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
P06328 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.78□□□□□ -0.52
P06328 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
P06328 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
P06328 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
P06328 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06328 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
P06328 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms