Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxa3P02831 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.47□□□□□ -0.25
Hoxa3P02831 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Hoxa3P02831 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Hoxa3P02831 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Hoxa3P02831 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.47□□□□□ -0.25
Hoxa3P02831 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Hoxa3P02831 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Gm13216-201ENSMUST00000117145 591 ntBASIC13.47□□□□□ -0.25
Hoxa3P02831 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Gm15372-201ENSMUST00000120729 834 ntBASIC13.47□□□□□ -0.25
Hoxa3P02831 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.47□□□□□ -0.25
Hoxa3P02831 Gm10052-201ENSMUST00000168019 960 ntBASIC13.47□□□□□ -0.25
Hoxa3P02831 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Gm44430-201ENSMUST00000203376 995 ntBASIC13.47□□□□□ -0.25
Hoxa3P02831 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.47□□□□□ -0.25
Hoxa3P02831 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Hoxa3P02831 Gm7729-201ENSMUST00000050143 801 ntBASIC13.47□□□□□ -0.25
Hoxa3P02831 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Hoxa3P02831 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxa3P02831 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa3P02831 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa3P02831 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa3P02831 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa3P02831 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Hoxa3P02831 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa3P02831 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa3P02831 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa3P02831 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa3P02831 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa3P02831 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa3P02831 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa3P02831 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Hoxa3P02831 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.46□□□□□ -0.25
Hoxa3P02831 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.46□□□□□ -0.25
Hoxa3P02831 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.46□□□□□ -0.25
Hoxa3P02831 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa3P02831 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxa3P02831 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Hoxa3P02831 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.46□□□□□ -0.25
Hoxa3P02831 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Hoxa3P02831 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Hoxa3P02831 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.46□□□□□ -0.26
Hoxa3P02831 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hoxa3P02831 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hoxa3P02831 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Hoxa3P02831 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.45□□□□□ -0.26
Hoxa3P02831 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Hoxa3P02831 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Hoxa3P02831 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.45□□□□□ -0.26
Hoxa3P02831 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.45□□□□□ -0.26
Hoxa3P02831 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Hoxa3P02831 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Hoxa3P02831 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Hoxa3P02831 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Hoxa3P02831 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Hoxa3P02831 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.45□□□□□ -0.26
Hoxa3P02831 Gm43347-201ENSMUST00000200226 580 ntBASIC13.45□□□□□ -0.26
Hoxa3P02831 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxa3P02831 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms