Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClppO88696 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClppO88696 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClppO88696 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClppO88696 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClppO88696 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClppO88696 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
ClppO88696 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ClppO88696 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.67■□□□□ 0.1
ClppO88696 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
ClppO88696 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.67■□□□□ 0.1
ClppO88696 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.67■□□□□ 0.1
ClppO88696 Gm27459-201ENSMUST00000184860 107 ntBASIC15.67■□□□□ 0.1
ClppO88696 Gm28659-201ENSMUST00000188013 759 ntBASIC15.67■□□□□ 0.1
ClppO88696 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.67■□□□□ 0.1
ClppO88696 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ClppO88696 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.67■□□□□ 0.1
ClppO88696 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClppO88696 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ClppO88696 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.66■□□□□ 0.1
ClppO88696 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ClppO88696 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ClppO88696 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
ClppO88696 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.66■□□□□ 0.1
ClppO88696 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.66■□□□□ 0.1
ClppO88696 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ClppO88696 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
ClppO88696 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClppO88696 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ClppO88696 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ClppO88696 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClppO88696 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClppO88696 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClppO88696 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClppO88696 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClppO88696 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClppO88696 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClppO88696 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClppO88696 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
ClppO88696 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ClppO88696 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.65■□□□□ 0.1
ClppO88696 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.65■□□□□ 0.1
ClppO88696 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClppO88696 Gm7461-201ENSMUST00000058918 827 ntBASIC15.65■□□□□ 0.1
ClppO88696 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ClppO88696 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClppO88696 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClppO88696 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.65■□□□□ 0.1
ClppO88696 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClppO88696 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ClppO88696 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
ClppO88696 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClppO88696 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.65■□□□□ 0.1
ClppO88696 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
ClppO88696 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
ClppO88696 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClppO88696 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ClppO88696 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClppO88696 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClppO88696 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClppO88696 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.64■□□□□ 0.09
ClppO88696 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClppO88696 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClppO88696 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ClppO88696 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms