Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tgfbr3O88393 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.24■□□□□ 0.03
Tgfbr3O88393 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.24■□□□□ 0.03
Tgfbr3O88393 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.24■□□□□ 0.03
Tgfbr3O88393 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.24■□□□□ 0.03
Tgfbr3O88393 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.24■□□□□ 0.03
Tgfbr3O88393 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.24■□□□□ 0.03
Tgfbr3O88393 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tgfbr3O88393 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
Tgfbr3O88393 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.23■□□□□ 0.03
Tgfbr3O88393 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Mir8117-201ENSMUST00000184773 107 ntBASIC15.23■□□□□ 0.03
Tgfbr3O88393 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tgfbr3O88393 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.22■□□□□ 0.03
Tgfbr3O88393 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.22■□□□□ 0.03
Tgfbr3O88393 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.22■□□□□ 0.03
Tgfbr3O88393 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Gm26308-201ENSMUST00000157768 69 ntBASIC15.22■□□□□ 0.03
Tgfbr3O88393 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tgfbr3O88393 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.22■□□□□ 0.03
Tgfbr3O88393 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Tgfbr3O88393 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms