Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC20.27■□□□□ 0.84
Vamp4O70480 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.27■□□□□ 0.84
Vamp4O70480 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.27■□□□□ 0.84
Vamp4O70480 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Vamp4O70480 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Vamp4O70480 Gm27741-201ENSMUST00000185060 237 ntBASIC20.27■□□□□ 0.84
Vamp4O70480 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.27■□□□□ 0.84
Vamp4O70480 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vamp4O70480 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vamp4O70480 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vamp4O70480 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vamp4O70480 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Vamp4O70480 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vamp4O70480 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vamp4O70480 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC20.26■□□□□ 0.83
Vamp4O70480 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vamp4O70480 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vamp4O70480 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vamp4O70480 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.26■□□□□ 0.83
Vamp4O70480 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.26■□□□□ 0.83
Vamp4O70480 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.26■□□□□ 0.83
Vamp4O70480 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.26■□□□□ 0.83
Vamp4O70480 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vamp4O70480 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vamp4O70480 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Vamp4O70480 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.26■□□□□ 0.83
Vamp4O70480 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vamp4O70480 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vamp4O70480 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vamp4O70480 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vamp4O70480 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vamp4O70480 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vamp4O70480 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vamp4O70480 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vamp4O70480 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vamp4O70480 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vamp4O70480 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Vamp4O70480 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vamp4O70480 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vamp4O70480 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Vamp4O70480 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vamp4O70480 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vamp4O70480 Gm6296-201ENSMUST00000222599 943 ntBASIC20.25■□□□□ 0.83
Vamp4O70480 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vamp4O70480 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Vamp4O70480 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Vamp4O70480 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vamp4O70480 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vamp4O70480 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vamp4O70480 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vamp4O70480 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
Vamp4O70480 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp4O70480 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp4O70480 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp4O70480 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp4O70480 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp4O70480 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp4O70480 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp4O70480 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp4O70480 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp4O70480 Gm12497-201ENSMUST00000138778 237 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Vamp4O70480 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp4O70480 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Gm8825-201ENSMUST00000182565 998 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Gm4518-201ENSMUST00000182638 718 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.24■□□□□ 0.83
Vamp4O70480 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp4O70480 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp4O70480 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp4O70480 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp4O70480 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Vamp4O70480 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vamp4O70480 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vamp4O70480 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms