Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarce1O54941 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarce1O54941 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.15■□□□□ 0.66
Smarce1O54941 Gm13436-201ENSMUST00000120418 567 ntBASIC19.15■□□□□ 0.66
Smarce1O54941 Gm26039-201ENSMUST00000158152 144 ntBASIC19.15■□□□□ 0.66
Smarce1O54941 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smarce1O54941 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smarce1O54941 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarce1O54941 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarce1O54941 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarce1O54941 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Smarce1O54941 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarce1O54941 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarce1O54941 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Smarce1O54941 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarce1O54941 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.14■□□□□ 0.65
Smarce1O54941 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarce1O54941 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarce1O54941 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smarce1O54941 Gm37055-201ENSMUST00000191866 133 ntBASIC19.14■□□□□ 0.65
Smarce1O54941 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
Smarce1O54941 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarce1O54941 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarce1O54941 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.14■□□□□ 0.65
Smarce1O54941 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Smarce1O54941 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smarce1O54941 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smarce1O54941 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarce1O54941 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarce1O54941 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarce1O54941 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smarce1O54941 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarce1O54941 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarce1O54941 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.13■□□□□ 0.65
Smarce1O54941 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarce1O54941 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarce1O54941 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarce1O54941 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smarce1O54941 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Smarce1O54941 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smarce1O54941 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarce1O54941 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.13■□□□□ 0.65
Smarce1O54941 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.13■□□□□ 0.65
Smarce1O54941 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.13■□□□□ 0.65
Smarce1O54941 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarce1O54941 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarce1O54941 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Smarce1O54941 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarce1O54941 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarce1O54941 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarce1O54941 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC19.13■□□□□ 0.65
Smarce1O54941 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Smarce1O54941 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarce1O54941 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smarce1O54941 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Smarce1O54941 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarce1O54941 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarce1O54941 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Smarce1O54941 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarce1O54941 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Smarce1O54941 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarce1O54941 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarce1O54941 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Smarce1O54941 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarce1O54941 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.12■□□□□ 0.65
Smarce1O54941 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarce1O54941 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarce1O54941 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarce1O54941 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Smarce1O54941 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.12■□□□□ 0.65
Smarce1O54941 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarce1O54941 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Smarce1O54941 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Smarce1O54941 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Smarce1O54941 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarce1O54941 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.11■□□□□ 0.65
Smarce1O54941 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Smarce1O54941 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Smarce1O54941 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarce1O54941 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarce1O54941 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarce1O54941 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.11■□□□□ 0.65
Smarce1O54941 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarce1O54941 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Smarce1O54941 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarce1O54941 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarce1O54941 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarce1O54941 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarce1O54941 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.11■□□□□ 0.65
Smarce1O54941 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarce1O54941 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarce1O54941 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarce1O54941 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarce1O54941 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarce1O54941 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarce1O54941 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarce1O54941 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarce1O54941 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarce1O54941 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarce1O54941 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms