Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Gm8089-201ENSMUST00000122463 968 ntBASIC14.23□□□□□ -0.13
Dkk1O54908 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Dkk1O54908 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Gm5587-201ENSMUST00000206270 674 ntBASIC14.23□□□□□ -0.13
Dkk1O54908 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Dkk1O54908 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.23□□□□□ -0.13
Dkk1O54908 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Dkk1O54908 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Gm20541-201ENSMUST00000173035 1406 ntBASIC14.23□□□□□ -0.13
Dkk1O54908 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Dkk1O54908 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.23□□□□□ -0.13
Dkk1O54908 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Dkk1O54908 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Dkk1O54908 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Dkk1O54908 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Dkk1O54908 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Dkk1O54908 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Gm25507-201ENSMUST00000116981 144 ntBASIC14.22□□□□□ -0.13
Dkk1O54908 Gm13183-201ENSMUST00000118615 789 ntBASIC14.22□□□□□ -0.13
Dkk1O54908 Gm15225-201ENSMUST00000120449 1017 ntBASIC14.22□□□□□ -0.13
Dkk1O54908 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.22□□□□□ -0.13
Dkk1O54908 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.22□□□□□ -0.13
Dkk1O54908 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.22□□□□□ -0.13
Dkk1O54908 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Dkk1O54908 Gm3760-201ENSMUST00000167475 804 ntBASIC14.22□□□□□ -0.13
Dkk1O54908 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.22□□□□□ -0.13
Dkk1O54908 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Dkk1O54908 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Dkk1O54908 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Dkk1O54908 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Dkk1O54908 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Dkk1O54908 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Dkk1O54908 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Dkk1O54908 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC14.22□□□□□ -0.13
Dkk1O54908 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.22□□□□□ -0.13
Dkk1O54908 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.22□□□□□ -0.13
Dkk1O54908 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Dkk1O54908 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Dkk1O54908 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dkk1O54908 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dkk1O54908 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Dkk1O54908 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dkk1O54908 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dkk1O54908 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dkk1O54908 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dkk1O54908 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dkk1O54908 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Dkk1O54908 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Dkk1O54908 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.21□□□□□ -0.13
Dkk1O54908 Gm24241-201ENSMUST00000157787 145 ntBASIC14.21□□□□□ -0.13
Dkk1O54908 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Dkk1O54908 Gm27861-201ENSMUST00000183920 214 ntBASIC14.21□□□□□ -0.13
Dkk1O54908 Gm42696-201ENSMUST00000199859 1142 ntBASIC14.21□□□□□ -0.13
Dkk1O54908 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dkk1O54908 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Dkk1O54908 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dkk1O54908 Ranbp1-201ENSMUST00000052325 923 ntTSL 3 BASIC14.21□□□□□ -0.13
Dkk1O54908 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dkk1O54908 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dkk1O54908 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.21□□□□□ -0.13
Dkk1O54908 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Dkk1O54908 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dkk1O54908 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.21□□□□□ -0.13
Dkk1O54908 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Dkk1O54908 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.21□□□□□ -0.14
Dkk1O54908 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dkk1O54908 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms