Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm9987-201ENSMUST00000069768 567 ntBASIC16.27■□□□□ 0.2
ChkaO54804 Gm8587-201ENSMUST00000076538 843 ntBASIC16.27■□□□□ 0.2
ChkaO54804 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ChkaO54804 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ChkaO54804 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ChkaO54804 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ChkaO54804 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ChkaO54804 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ChkaO54804 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ChkaO54804 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ChkaO54804 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ChkaO54804 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ChkaO54804 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ChkaO54804 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.26■□□□□ 0.19
ChkaO54804 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ChkaO54804 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
ChkaO54804 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ChkaO54804 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.25■□□□□ 0.19
ChkaO54804 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
ChkaO54804 Gm27389-201ENSMUST00000183622 195 ntBASIC16.25■□□□□ 0.19
ChkaO54804 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ChkaO54804 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ChkaO54804 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.25■□□□□ 0.19
ChkaO54804 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
ChkaO54804 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ChkaO54804 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ChkaO54804 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ChkaO54804 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ChkaO54804 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ChkaO54804 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ChkaO54804 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ChkaO54804 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ChkaO54804 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ChkaO54804 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ChkaO54804 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ChkaO54804 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.24■□□□□ 0.19
ChkaO54804 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms