Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.29■□□□□ 0.68
NpcdF8VQB8 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.29■□□□□ 0.68
NpcdF8VQB8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NpcdF8VQB8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NpcdF8VQB8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NpcdF8VQB8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NpcdF8VQB8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NpcdF8VQB8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.28■□□□□ 0.68
NpcdF8VQB8 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NpcdF8VQB8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NpcdF8VQB8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NpcdF8VQB8 Gm5682-201ENSMUST00000173402 505 ntBASIC19.28■□□□□ 0.68
NpcdF8VQB8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.28■□□□□ 0.68
NpcdF8VQB8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.28■□□□□ 0.68
NpcdF8VQB8 Gm5312-201ENSMUST00000203728 547 ntBASIC19.28■□□□□ 0.68
NpcdF8VQB8 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.28■□□□□ 0.68
NpcdF8VQB8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NpcdF8VQB8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NpcdF8VQB8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
NpcdF8VQB8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NpcdF8VQB8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NpcdF8VQB8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NpcdF8VQB8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NpcdF8VQB8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NpcdF8VQB8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NpcdF8VQB8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NpcdF8VQB8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NpcdF8VQB8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NpcdF8VQB8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NpcdF8VQB8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NpcdF8VQB8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.27■□□□□ 0.68
NpcdF8VQB8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NpcdF8VQB8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NpcdF8VQB8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NpcdF8VQB8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NpcdF8VQB8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NpcdF8VQB8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NpcdF8VQB8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NpcdF8VQB8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NpcdF8VQB8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NpcdF8VQB8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
NpcdF8VQB8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NpcdF8VQB8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.25■□□□□ 0.67
NpcdF8VQB8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NpcdF8VQB8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.25■□□□□ 0.67
NpcdF8VQB8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NpcdF8VQB8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NpcdF8VQB8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NpcdF8VQB8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NpcdF8VQB8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NpcdF8VQB8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NpcdF8VQB8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NpcdF8VQB8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NpcdF8VQB8 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.25■□□□□ 0.67
NpcdF8VQB8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NpcdF8VQB8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NpcdF8VQB8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NpcdF8VQB8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NpcdF8VQB8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NpcdF8VQB8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NpcdF8VQB8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NpcdF8VQB8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NpcdF8VQB8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NpcdF8VQB8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NpcdF8VQB8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NpcdF8VQB8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NpcdF8VQB8 Gm27646-201ENSMUST00000183989 110 ntBASIC19.24■□□□□ 0.67
NpcdF8VQB8 Gm27300-201ENSMUST00000184085 97 ntBASIC19.24■□□□□ 0.67
NpcdF8VQB8 Gm27335-201ENSMUST00000184758 97 ntBASIC19.24■□□□□ 0.67
NpcdF8VQB8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.24■□□□□ 0.67
NpcdF8VQB8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NpcdF8VQB8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NpcdF8VQB8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms