Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb9E9Q5G2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Gm11452-201ENSMUST00000122376 690 ntBASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Mir8098-201ENSMUST00000184011 137 ntBASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Gm28659-201ENSMUST00000188013 759 ntBASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb9E9Q5G2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhb9E9Q5G2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhb9E9Q5G2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Pcdhb9E9Q5G2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhb9E9Q5G2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhb9E9Q5G2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhb9E9Q5G2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.89■□□□□ 0.62
Pcdhb9E9Q5G2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhb9E9Q5G2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 Gm13884-201ENSMUST00000118103 829 ntBASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 Gm7461-201ENSMUST00000058918 827 ntBASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Pcdhb9E9Q5G2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Rps4l-201ENSMUST00000071745 943 ntBASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb9E9Q5G2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm8825-201ENSMUST00000182565 998 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm4518-201ENSMUST00000182638 718 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm8655-201ENSMUST00000221159 852 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms