Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Gm7889-201ENSMUST00000185591 958 ntBASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Gm7370-201ENSMUST00000219471 767 ntBASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm28043E0CXC2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm28043E0CXC2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm28043E0CXC2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm28043E0CXC2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28043E0CXC2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28043E0CXC2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28043E0CXC2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28043E0CXC2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm28043E0CXC2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
Gm28043E0CXC2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.15■□□□□ 0.18
Gm28043E0CXC2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.15■□□□□ 0.18
Gm28043E0CXC2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28043E0CXC2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28043E0CXC2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28043E0CXC2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28043E0CXC2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Gm28043E0CXC2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm28043E0CXC2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm28043E0CXC2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Gm28043E0CXC2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28043E0CXC2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28043E0CXC2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gm28043E0CXC2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28043E0CXC2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm28043E0CXC2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.14■□□□□ 0.17
Gm28043E0CXC2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28043E0CXC2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28043E0CXC2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28043E0CXC2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm28043E0CXC2 Gm45058-201ENSMUST00000205810 766 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms