Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim30cD3YVI9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim30cD3YVI9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim30cD3YVI9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
Trim30cD3YVI9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim30cD3YVI9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.58■□□□□ 0.41
Trim30cD3YVI9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.58■□□□□ 0.41
Trim30cD3YVI9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim30cD3YVI9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim30cD3YVI9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim30cD3YVI9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Gm27000-201ENSMUST00000182943 842 ntBASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Gm27389-201ENSMUST00000183622 195 ntBASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Gm21559-201ENSMUST00000220638 855 ntBASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Gm8587-201ENSMUST00000076538 843 ntBASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim30cD3YVI9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms